Computational Biology

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Quantitative Graph Theory: Mathematical Foundations and Applications

Quantitative Graph Theory: Mathematical Foundations and Applications

Matthias Dehmer, Frank Emmert-Streib

October 27, 2014

The first book devoted exclusively to quantitative graph theory, Quantitative Graph Theory: Mathematical Foundations and Applications presents and demonstrates existing and novel methods for analyzing graphs quantitatively. Incorporating interdisciplinary knowledge from graph theory, information...

RNA-seq Data Analysis: A Practical Approach

RNA-seq Data Analysis: A Practical Approach

Eija Korpelainen, Jarno Tuimala, Panu Somervuo, Mikael Huss, Garry Wong

September 19, 2014

The State of the Art in Transcriptome AnalysisRNA sequencing (RNA-seq) data offers unprecedented information about the transcriptome, but harnessing this information with bioinformatics tools is typically a bottleneck. RNA-seq Data Analysis: A Practical Approach enables researchers to examine...

Molecular Modeling at the Atomic Scale: Methods and Applications in Quantitative Biology

Molecular Modeling at the Atomic Scale: Methods and Applications in Quantitative Biology

Ruhong Zhou

August 21, 2014

Although molecular modeling has been around for a while, the groundbreaking advancement of massively parallel supercomputers and novel algorithms for parallelization is shaping this field into an exciting new area. Developments in molecular modeling from experimental and computational techniques...

Computational and Visualization Techniques for Structural Bioinformatics Using Chimera

Computational and Visualization Techniques for Structural Bioinformatics Using Chimera

Forbes J. Burkowski

July 29, 2014

A Step-by-Step Guide to Describing Biomolecular Structure Computational and Visualization Techniques for Structural Bioinformatics Using Chimera shows how to perform computations with Python scripts in the Chimera environment. It focuses on the three core areas needed to study structural...

Computational Biophysics of the Skin

Computational Biophysics of the Skin

Bernard Querleux

July 25, 2014

The accessibility of the skin in vivo has resulted in the development of non-invasive methods in the past 40 years that offer accurate measurements of skin properties and structures from microscopic to macroscopic levels. However, the mechanisms involved in these properties are still only partly...

Bayesian Networks: With Examples in R

Bayesian Networks: With Examples in R

Marco Scutari, Jean-Baptiste Denis

June 20, 2014

Understand the Foundations of Bayesian Networks—Core Properties and Definitions Explained Bayesian Networks: With Examples in R introduces Bayesian networks using a hands-on approach. Simple yet meaningful examples in R illustrate each step of the modeling process. The examples start from the...

Bayesian Phylogenetics: Methods, Algorithms, and Applications

Bayesian Phylogenetics: Methods, Algorithms, and Applications

Ming-Hui Chen, Lynn Kuo, Paul O. Lewis

May 27, 2014

Offering a rich diversity of models, Bayesian phylogenetics allows evolutionary biologists, systematists, ecologists, and epidemiologists to obtain answers to very detailed phylogenetic questions. Suitable for graduate-level researchers in statistics and biology, Bayesian Phylogenetics: Methods,...

Managing Your Biological Data with Python

Managing Your Biological Data with Python

Allegra Via, Kristian Rother, Anna Tramontano

March 18, 2014

Take Control of Your Data and Use Python with Confidence Requiring no prior programming experience, Managing Your Biological Data with Python empowers biologists and other life scientists to work with biological data on their own using the Python language. The book teaches them not only how to...

Microarray Image and Data Analysis: Theory and Practice

Microarray Image and Data Analysis: Theory and Practice

Luis Rueda

March 06, 2014

Microarray Image and Data Analysis: Theory and Practice is a compilation of the latest and greatest microarray image and data analysis methods from the multidisciplinary international research community. Delivering a detailed discussion of the biological aspects and applications of microarrays, the...

Analysis of Complex Diseases: A Mathematical Perspective

Analysis of Complex Diseases: A Mathematical Perspective

Guanyu Wang, PhD

December 18, 2013

A complex disease involves many etiological and risk factors operating at multiple levels—molecular, cellular, organismal, and environmental. The incidence of such diseases as cancer, obesity, and diabetes are increasing in occurrence, urging us to think fundamentally and use a broader perspective...

Foundational and Applied Statistics for Biologists Using R

Foundational and Applied Statistics for Biologists Using R

Ken A. Aho

December 17, 2013

Full of biological applications, exercises, and interactive graphical examples, Foundational and Applied Statistics for Biologists Using R presents comprehensive coverage of both modern analytical methods and statistical foundations. The author harnesses the inherent properties of the R environment...

Medical Applications of Artificial Intelligence

Medical Applications of Artificial Intelligence

Arvin Agah

November 06, 2013

Enhanced, more reliable, and better understood than in the past, artificial intelligence (AI) systems can make providing healthcare more accurate, affordable, accessible, consistent, and efficient. However, AI technologies have not been as well integrated into medicine as predicted. In order to...